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Index of /EvidentialGene/daphnia/daphnia_pulex

      Name                     Last modified       Size  

[DIR] Parent Directory 07-Jul-2017 12:50 - [DIR] daphnia_pulex_genes2010/ 30-Jul-2014 13:32 - [DIR] daphnia_pulex_genes2017/ 18-Apr-2017 15:47 -

Daphnia pulex gene set, built 2010 April.
Further data and details are at Daphnia pulex Genes 2010 of wfleabase.org
> Daphnia genomes at the crossroads, 2010 poster with comments on new genes.
See also Daphnia genomes at the crossroads, 2010 poster with comments on new genes.

Notable stats for Daphnia pulex 2010 (Genes2) vs 2007 (JGI_V11) genes:
  -- Genes2 recovers 82% of protein homology, versus only 42% for JGI
    - Genes2 has 44% best matches among arthropods to HUMAN genes, vs 21% for 2007 Daphnia genes
  -- Genes2 recovers 90% of EST, versus 75% for JGI
  -- Genes2 recovers 66% (5Mb) of 7.6 Mb tile expression not in JGI set (tar_genes)

Developed at the Genome Informatics Lab of Indiana University Biology Department